Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.36■□□□□ 0.53
LRCH1Q9Y2L9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 IGHV3-19-201ENST00000521488 291 ntBASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 AL139384.1-201ENST00000612143 3047 ntBASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PCDHA12-202ENST00000613593 2588 ntBASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.35■□□□□ 0.53
LRCH1Q9Y2L9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 BCL2-203ENST00000589955 5011 ntBASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
LRCH1Q9Y2L9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 KRT8P36-201ENST00000489121 1440 ntBASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 TSPY26P-201ENST00000476365 1326 ntBASIC18.33■□□□□ 0.53
LRCH1Q9Y2L9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 AP005435.1-201ENST00000529293 1178 ntBASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 LINC00896-202ENST00000609602 2128 ntBASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRCH1Q9Y2L9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms