Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 AP001330.3-201ENST00000520123 633 ntBASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 KRT18P20-201ENST00000548986 1279 ntBASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 AP001160.3-201ENST00000601484 763 ntBASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERGIC3Q9Y282 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 AC087633.2-202ENST00000565166 1439 ntBASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 TNRC18P3-201ENST00000441896 2691 ntBASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERGIC3Q9Y282 AC009053.2-201ENST00000563701 2365 ntBASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.62■□□□□ 0.41
ERGIC3Q9Y282 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 IRS3P-201ENST00000223076 1006 ntBASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 EDA-201ENST00000338901 1233 ntBASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.61■□□□□ 0.41
ERGIC3Q9Y282 AC104187.1-201ENST00000607510 612 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms