Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 AF213884.3-201ENST00000563833 479 ntBASIC18.72■□□□□ 0.59
NDE1Q9NXR1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 Z98044.1-201ENST00000632503 1764 ntBASIC18.72■□□□□ 0.59
NDE1Q9NXR1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NDE1Q9NXR1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 AC093525.10-201ENST00000625130 1569 ntBASIC18.71■□□□□ 0.59
NDE1Q9NXR1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
NDE1Q9NXR1 AC019069.1-201ENST00000610008 1333 ntBASIC18.71■□□□□ 0.59
NDE1Q9NXR1 HTR7P1-202ENST00000624664 4411 ntBASIC18.71■□□□□ 0.59
NDE1Q9NXR1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NDE1Q9NXR1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 AL031598.1-201ENST00000561511 1773 ntBASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDE1Q9NXR1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 MIR6084-201ENST00000622012 110 ntBASIC18.69■□□□□ 0.58
NDE1Q9NXR1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NDE1Q9NXR1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NDE1Q9NXR1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms