Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 AC069152.1-201ENST00000438030 544 ntBASIC18.01■□□□□ 0.47
RLIMQ9NVW2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 AC060766.5-201ENST00000590539 871 ntBASIC18.01■□□□□ 0.47
RLIMQ9NVW2 AC133041.1-202ENST00000642053 222 ntBASIC18.01■□□□□ 0.47
RLIMQ9NVW2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.01■□□□□ 0.47
RLIMQ9NVW2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18■□□□□ 0.47
RLIMQ9NVW2 AC007613.1-201ENST00000572811 2597 ntBASIC18■□□□□ 0.47
RLIMQ9NVW2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RLIMQ9NVW2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18■□□□□ 0.47
RLIMQ9NVW2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18■□□□□ 0.47
RLIMQ9NVW2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18■□□□□ 0.47
RLIMQ9NVW2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18■□□□□ 0.47
RLIMQ9NVW2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 AC142086.2-201ENST00000569753 217 ntBASIC18■□□□□ 0.47
RLIMQ9NVW2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18■□□□□ 0.47
RLIMQ9NVW2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18■□□□□ 0.47
RLIMQ9NVW2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18■□□□□ 0.47
RLIMQ9NVW2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 AL049812.1-201ENST00000432563 2267 ntBASIC18■□□□□ 0.47
RLIMQ9NVW2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18■□□□□ 0.47
RLIMQ9NVW2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.99■□□□□ 0.47
RLIMQ9NVW2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.98■□□□□ 0.47
RLIMQ9NVW2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 AL161938.1-201ENST00000569833 2180 ntBASIC17.98■□□□□ 0.47
RLIMQ9NVW2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RLIMQ9NVW2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms