Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 AP002982.1-201ENST00000492365 877 ntBASIC19.96■□□□□ 0.79
VPS45Q9NRW7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 AC004264.1-201ENST00000608354 794 ntBASIC19.96■□□□□ 0.79
VPS45Q9NRW7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS45Q9NRW7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 AC124283.5-201ENST00000624661 1809 ntBASIC19.95■□□□□ 0.78
VPS45Q9NRW7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS45Q9NRW7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 TREX1-205ENST00000625293 1783 ntBASIC19.94■□□□□ 0.78
VPS45Q9NRW7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 NTF6B-201ENST00000591913 560 ntBASIC19.94■□□□□ 0.78
VPS45Q9NRW7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS45Q9NRW7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 DUX4L26-201ENST00000489078 1255 ntBASIC19.93■□□□□ 0.78
VPS45Q9NRW7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 AC087388.1-201ENST00000571370 1112 ntBASIC19.93■□□□□ 0.78
VPS45Q9NRW7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS45Q9NRW7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS45Q9NRW7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms