Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 AC096733.2-201ENST00000609937 1394 ntBASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDLIM7Q9NR12 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 SLC25A1P2-201ENST00000430693 912 ntBASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 HCG4P8-203ENST00000443049 980 ntBASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 CLEC4GP1-201ENST00000596555 870 ntBASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 AC010653.2-201ENST00000623505 997 ntBASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDLIM7Q9NR12 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDLIM7Q9NR12 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PDLIM7Q9NR12 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AC092338.2-201ENST00000568827 1415 ntBASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AL671277.2-201ENST00000458060 996 ntBASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms