Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 MIR4497-201ENST00000583208 89 ntBASIC19.92■□□□□ 0.78
USP29Q9HBJ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
USP29Q9HBJ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 TEX21P-204ENST00000641479 1693 ntBASIC19.91■□□□□ 0.78
USP29Q9HBJ7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 AC104417.2-201ENST00000562989 1793 ntBASIC19.91■□□□□ 0.78
USP29Q9HBJ7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 KRT8P8-201ENST00000434750 1448 ntBASIC19.91■□□□□ 0.78
USP29Q9HBJ7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
USP29Q9HBJ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 AC004408.2-201ENST00000623613 2777 ntBASIC19.9■□□□□ 0.78
USP29Q9HBJ7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.9■□□□□ 0.78
USP29Q9HBJ7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 KRT18P16-201ENST00000510337 1294 ntBASIC19.9■□□□□ 0.78
USP29Q9HBJ7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 AC141586.3-201ENST00000562166 1838 ntBASIC19.9■□□□□ 0.78
USP29Q9HBJ7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
USP29Q9HBJ7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
USP29Q9HBJ7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP29Q9HBJ7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
USP29Q9HBJ7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
USP29Q9HBJ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms