Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
EFCC1Q9HA90 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
EFCC1Q9HA90 AC006128.1-201ENST00000624704 1661 ntBASIC22.52■■□□□ 1.2
EFCC1Q9HA90 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
EFCC1Q9HA90 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 AC246785.2-201ENST00000432512 513 ntBASIC22.5■■□□□ 1.19
EFCC1Q9HA90 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 VENTXP5-201ENST00000523979 775 ntBASIC22.5■■□□□ 1.19
EFCC1Q9HA90 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 AL441883.1-201ENST00000566170 1045 ntBASIC22.5■■□□□ 1.19
EFCC1Q9HA90 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 HLA-A-209ENST00000638375 975 ntBASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
EFCC1Q9HA90 AC007225.1-201ENST00000566331 1836 ntBASIC22.5■■□□□ 1.19
EFCC1Q9HA90 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
EFCC1Q9HA90 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 TSPY17P-201ENST00000450329 467 ntBASIC22.48■■□□□ 1.19
EFCC1Q9HA90 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.48■■□□□ 1.19
EFCC1Q9HA90 PRSS44-201ENST00000515154 1146 ntBASIC22.48■■□□□ 1.19
EFCC1Q9HA90 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 AL136038.3-201ENST00000561909 1096 ntBASIC22.48■■□□□ 1.19
EFCC1Q9HA90 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 AL023973.1-201ENST00000624619 620 ntBASIC22.48■■□□□ 1.19
EFCC1Q9HA90 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
EFCC1Q9HA90 PHGDH-210ENST00000641115 1638 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms