Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 AC116351.2-201ENST00000606540 1585 ntBASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXP3Q9BZS1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 AL161938.1-201ENST00000569833 2180 ntBASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 AC018553.1-201ENST00000616682 1458 ntBASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXP3Q9BZS1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXP3Q9BZS1 AC079598.2-202ENST00000546624 1451 ntBASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 AC120498.9-201ENST00000339021 3867 ntBASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXP3Q9BZS1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 UNC93B4-201ENST00000505679 747 ntBASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXP3Q9BZS1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms