Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 AC104417.2-201ENST00000562989 1793 ntBASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UPF3BQ9BZI7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 AC141586.3-201ENST00000562166 1838 ntBASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
UPF3BQ9BZI7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 UNC93B4-201ENST00000505679 747 ntBASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
UPF3BQ9BZI7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 KRT8P8-201ENST00000434750 1448 ntBASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 AL121829.2-201ENST00000620908 328 ntBASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UPF3BQ9BZI7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.27
UPF3BQ9BZI7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.01■■□□□ 1.27
UPF3BQ9BZI7 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms