Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDHD3Q9BSH5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HDHD3Q9BSH5 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDHD3Q9BSH5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 BX276092.2-201ENST00000417668 665 ntBASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 AC022517.1-201ENST00000592429 346 ntBASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 AL050303.2-201ENST00000619798 666 ntBASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HDHD3Q9BSH5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 AC105036.2-201ENST00000569468 176 ntBASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 AC133552.2-202ENST00000575694 574 ntBASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HDHD3Q9BSH5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.3■□□□□ 0.2
HDHD3Q9BSH5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 SDHAP1-207ENST00000440850 2000 ntBASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDHD3Q9BSH5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms