Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.34■□□□□ 0.21
SEC22CQ9BRL7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SEC22CQ9BRL7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 KRT16P6-202ENST00000425692 1426 ntBASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.33■□□□□ 0.2
SEC22CQ9BRL7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 AC233992.3-201ENST00000607491 485 ntBASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 AC008894.3-201ENST00000624324 3103 ntBASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SEC22CQ9BRL7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ABALON-201ENST00000629058 1903 ntBASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 PTBP1P-201ENST00000554374 1601 ntBASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 KRT8P17-201ENST00000453110 1448 ntBASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SEC22CQ9BRL7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SEC22CQ9BRL7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms