Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 MTDHP1-201ENST00000605323 784 ntBASIC17.91■□□□□ 0.46
TM9SF2Q99805 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TM9SF2Q99805 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TM9SF2Q99805 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 HLA-G-202ENST00000376815 851 ntBASIC17.9■□□□□ 0.46
TM9SF2Q99805 HLA-G-203ENST00000376818 1127 ntBASIC17.9■□□□□ 0.46
TM9SF2Q99805 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 AC008550.1-201ENST00000511500 884 ntBASIC17.9■□□□□ 0.46
TM9SF2Q99805 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 PRKY-204ENST00000533551 1019 ntBASIC17.9■□□□□ 0.46
TM9SF2Q99805 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.9■□□□□ 0.46
TM9SF2Q99805 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TM9SF2Q99805 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TM9SF2Q99805 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TM9SF2Q99805 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 AC239809.2-201ENST00000415381 517 ntBASIC17.89■□□□□ 0.45
TM9SF2Q99805 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 TMEM179-206ENST00000616017 1645 ntBASIC17.89■□□□□ 0.45
TM9SF2Q99805 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
TM9SF2Q99805 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TM9SF2Q99805 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms