Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.21■□□□□ 0.19
CCL13Q99616 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.21■□□□□ 0.19
CCL13Q99616 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL13Q99616 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.21■□□□□ 0.19
CCL13Q99616 AF186192.3-201ENST00000583427 947 ntBASIC16.21■□□□□ 0.19
CCL13Q99616 AC138932.1-201ENST00000534164 6830 ntBASIC16.21■□□□□ 0.19
CCL13Q99616 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL13Q99616 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCL13Q99616 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.21■□□□□ 0.19
CCL13Q99616 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CCL13Q99616 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CCL13Q99616 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCL13Q99616 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 AL135905.2-201ENST00000584934 1404 ntBASIC16.2■□□□□ 0.18
CCL13Q99616 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCL13Q99616 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL13Q99616 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 AL353807.1-201ENST00000427475 662 ntBASIC16.2■□□□□ 0.18
CCL13Q99616 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.2■□□□□ 0.18
CCL13Q99616 AC008550.1-201ENST00000511500 884 ntBASIC16.2■□□□□ 0.18
CCL13Q99616 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL13Q99616 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.2■□□□□ 0.18
CCL13Q99616 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.2■□□□□ 0.18
CCL13Q99616 Z99916.2-201ENST00000604037 246 ntBASIC16.2■□□□□ 0.18
CCL13Q99616 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 HLA-A-209ENST00000638375 975 ntBASIC16.2■□□□□ 0.18
CCL13Q99616 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCL13Q99616 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCL13Q99616 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCL13Q99616 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
CCL13Q99616 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCL13Q99616 LINC01465-201ENST00000408887 1940 ntBASIC16.19■□□□□ 0.18
CCL13Q99616 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCL13Q99616 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCL13Q99616 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.19■□□□□ 0.18
CCL13Q99616 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL13Q99616 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.19■□□□□ 0.18
CCL13Q99616 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 RPS2P55-201ENST00000397318 883 ntBASIC16.19■□□□□ 0.18
CCL13Q99616 RPS2P4-201ENST00000476944 856 ntBASIC16.19■□□□□ 0.18
CCL13Q99616 AC107956.1-201ENST00000494359 873 ntBASIC16.19■□□□□ 0.18
CCL13Q99616 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.19■□□□□ 0.18
CCL13Q99616 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL13Q99616 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL13Q99616 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL13Q99616 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL13Q99616 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms