Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
S1PR3Q99500 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
S1PR3Q99500 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
S1PR3Q99500 AL032819.2-201ENST00000624543 2162 ntBASIC15.95■□□□□ 0.14
S1PR3Q99500 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.95■□□□□ 0.14
S1PR3Q99500 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.95■□□□□ 0.14
S1PR3Q99500 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.95■□□□□ 0.14
S1PR3Q99500 RNA5SP413-201ENST00000516373 109 ntBASIC15.95■□□□□ 0.14
S1PR3Q99500 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.95■□□□□ 0.14
S1PR3Q99500 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.95■□□□□ 0.14
S1PR3Q99500 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.95■□□□□ 0.14
S1PR3Q99500 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
S1PR3Q99500 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.95■□□□□ 0.14
S1PR3Q99500 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
S1PR3Q99500 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.94■□□□□ 0.14
S1PR3Q99500 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
S1PR3Q99500 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 HTR7P1-202ENST00000624664 4411 ntBASIC15.94■□□□□ 0.14
S1PR3Q99500 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.94■□□□□ 0.14
S1PR3Q99500 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.94■□□□□ 0.14
S1PR3Q99500 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.94■□□□□ 0.14
S1PR3Q99500 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
S1PR3Q99500 AP006587.1-201ENST00000534129 1502 ntBASIC15.94■□□□□ 0.14
S1PR3Q99500 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.94■□□□□ 0.14
S1PR3Q99500 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.93■□□□□ 0.14
S1PR3Q99500 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
S1PR3Q99500 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.93■□□□□ 0.14
S1PR3Q99500 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.93■□□□□ 0.14
S1PR3Q99500 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.93■□□□□ 0.14
S1PR3Q99500 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
S1PR3Q99500 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
S1PR3Q99500 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.93■□□□□ 0.14
S1PR3Q99500 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.93■□□□□ 0.14
S1PR3Q99500 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
S1PR3Q99500 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.92■□□□□ 0.14
S1PR3Q99500 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
S1PR3Q99500 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
S1PR3Q99500 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms