Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASD1Q96PB1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.67■□□□□ 0.9
CASD1Q96PB1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASD1Q96PB1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASD1Q96PB1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 AL671277.2-201ENST00000458060 996 ntBASIC20.67■□□□□ 0.9
CASD1Q96PB1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASD1Q96PB1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.67■□□□□ 0.9
CASD1Q96PB1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASD1Q96PB1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 AC099778.1-201ENST00000568593 1911 ntBASIC20.66■□□□□ 0.9
CASD1Q96PB1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASD1Q96PB1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.66■□□□□ 0.9
CASD1Q96PB1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 AC009947.2-201ENST00000444014 672 ntBASIC20.65■□□□□ 0.9
CASD1Q96PB1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASD1Q96PB1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
CASD1Q96PB1 AC104417.2-201ENST00000562989 1793 ntBASIC20.64■□□□□ 0.9
CASD1Q96PB1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASD1Q96PB1 AC092667.1-201ENST00000434301 2586 ntBASIC20.64■□□□□ 0.9
CASD1Q96PB1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASD1Q96PB1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.64■□□□□ 0.89
CASD1Q96PB1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASD1Q96PB1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CASD1Q96PB1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASD1Q96PB1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms