Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM11Q96F44 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM11Q96F44 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM11Q96F44 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM11Q96F44 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 SDHAP1-207ENST00000440850 2000 ntBASIC20.43■□□□□ 0.86
TRIM11Q96F44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 AL161938.1-201ENST00000569833 2180 ntBASIC20.43■□□□□ 0.86
TRIM11Q96F44 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
TRIM11Q96F44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM11Q96F44 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
TRIM11Q96F44 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM11Q96F44 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM11Q96F44 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM11Q96F44 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms