Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 AC060766.5-201ENST00000590539 871 ntBASIC20.3■□□□□ 0.84
RNF25Q96BH1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF25Q96BH1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF25Q96BH1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 AC006213.4-201ENST00000616184 634 ntBASIC20.29■□□□□ 0.84
RNF25Q96BH1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF25Q96BH1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF25Q96BH1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.28■□□□□ 0.84
RNF25Q96BH1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 AC090192.1-201ENST00000517740 490 ntBASIC20.28■□□□□ 0.84
RNF25Q96BH1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 AC104771.1-201ENST00000603335 964 ntBASIC20.28■□□□□ 0.84
RNF25Q96BH1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF25Q96BH1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF25Q96BH1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.27■□□□□ 0.84
RNF25Q96BH1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 AC069152.1-201ENST00000438030 544 ntBASIC20.27■□□□□ 0.84
RNF25Q96BH1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF25Q96BH1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF25Q96BH1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF25Q96BH1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF25Q96BH1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RNF25Q96BH1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF25Q96BH1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF25Q96BH1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.26■□□□□ 0.83
RNF25Q96BH1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms