Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 CDV3P1-201ENST00000471403 739 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 AC079140.4-201ENST00000507448 529 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 AL031963.3-201ENST00000606441 850 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 PTBP1P-201ENST00000554374 1601 ntBASIC17.05■□□□□ 0.32
AP3S1Q92572 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
AP3S1Q92572 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP3S1Q92572 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP3S1Q92572 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
AP3S1Q92572 KRT8P20-201ENST00000423953 1409 ntBASIC17.04■□□□□ 0.32
AP3S1Q92572 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
AP3S1Q92572 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S1Q92572 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S1Q92572 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.04■□□□□ 0.32
AP3S1Q92572 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.04■□□□□ 0.32
AP3S1Q92572 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.04■□□□□ 0.32
AP3S1Q92572 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
AP3S1Q92572 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP3S1Q92572 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.04■□□□□ 0.32
AP3S1Q92572 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.04■□□□□ 0.32
AP3S1Q92572 AC087633.2-202ENST00000565166 1439 ntBASIC17.04■□□□□ 0.32
AP3S1Q92572 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3S1Q92572 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 AL355001.2-201ENST00000620617 1191 ntBASIC17.03■□□□□ 0.32
AP3S1Q92572 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.03■□□□□ 0.32
AP3S1Q92572 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
AP3S1Q92572 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
AP3S1Q92572 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 PHGDH-210ENST00000641115 1638 ntBASIC17.03■□□□□ 0.32
AP3S1Q92572 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
AP3S1Q92572 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP3S1Q92572 FP475955.4-201ENST00000623131 1990 ntBASIC17.02■□□□□ 0.32
AP3S1Q92572 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
AP3S1Q92572 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
AP3S1Q92572 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
AP3S1Q92572 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms