Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB3IL1Q8TBN0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB3IL1Q8TBN0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3IL1Q8TBN0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3IL1Q8TBN0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RAB3IL1Q8TBN0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3IL1Q8TBN0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 AC016405.3-201ENST00000607710 860 ntBASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3IL1Q8TBN0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 AC093525.10-201ENST00000625130 1569 ntBASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3IL1Q8TBN0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB3IL1Q8TBN0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms