Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.67■■□□□ 1.22
SMARCC2Q8TAQ2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 TNXA-203ENST00000507684 2038 ntBASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SMARCC2Q8TAQ2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 MIR718-201ENST00000390190 70 ntBASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SMARCC2Q8TAQ2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
SMARCC2Q8TAQ2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 KRT18P16-201ENST00000510337 1294 ntBASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 LINC01465-201ENST00000408887 1940 ntBASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 TEX21P-204ENST00000641479 1693 ntBASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SMARCC2Q8TAQ2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 AC104417.2-201ENST00000562989 1793 ntBASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMARCC2Q8TAQ2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms