Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
TMEFF1Q8IYR6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 DUSP5P1-201ENST00000441325 1139 ntBASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 BX119927.1-201ENST00000636596 1552 ntBASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEFF1Q8IYR6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AL157384.1-201ENST00000445995 2473 ntBASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 KRT18P38-201ENST00000449496 1282 ntBASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 PRSS44-201ENST00000515154 1146 ntBASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 CKBP1-201ENST00000565489 1086 ntBASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 KRT8P45-201ENST00000414328 1447 ntBASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEFF1Q8IYR6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 HCG4P8-203ENST00000443049 980 ntBASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEFF1Q8IYR6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
TMEFF1Q8IYR6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 AC116407.4-201ENST00000623319 1061 ntBASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEFF1Q8IYR6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms