Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.77■□□□□ 0.92
NPAS4Q8IUM7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPAS4Q8IUM7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPAS4Q8IUM7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPAS4Q8IUM7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 AP005212.1-201ENST00000581547 1997 ntBASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 AC116407.4-201ENST00000623319 1061 ntBASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPAS4Q8IUM7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 KRT126P-201ENST00000549467 1181 ntBASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 AC093458.2-201ENST00000623150 629 ntBASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
NPAS4Q8IUM7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 KRT18P48-201ENST00000434763 852 ntBASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPAS4Q8IUM7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 AL162377.1-201ENST00000618844 1793 ntBASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 AL136038.3-201ENST00000561909 1096 ntBASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 AC007375.3-201ENST00000600936 2314 ntBASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPAS4Q8IUM7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPAS4Q8IUM7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms