Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ZNF546Q86UE3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 AC008175.2-201ENST00000612840 297 ntBASIC16.06■□□□□ 0.16
ZNF546Q86UE3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.06■□□□□ 0.16
ZNF546Q86UE3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 ABALON-201ENST00000629058 1903 ntBASIC16.05■□□□□ 0.16
ZNF546Q86UE3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ZNF546Q86UE3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 AP001271.2-201ENST00000624018 1556 ntBASIC16.04■□□□□ 0.16
ZNF546Q86UE3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 FP475955.4-201ENST00000623131 1990 ntBASIC16.04■□□□□ 0.16
ZNF546Q86UE3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ZNF546Q86UE3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ZNF546Q86UE3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms