Protein–RNA interactions for Protein: Q7RTP0

NIPA1, Magnesium transporter NIPA1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA1Q7RTP0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
NIPA1Q7RTP0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NIPA1Q7RTP0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 SDHAP1-207ENST00000440850 2000 ntBASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 TSPY21P-201ENST00000433481 731 ntBASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 LINC01568-207ENST00000641790 1380 ntBASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.7■■□□□ 1.06
NIPA1Q7RTP0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 CA15P1-201ENST00000481698 905 ntBASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NIPA1Q7RTP0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 SLC25A1P2-201ENST00000430693 912 ntBASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 KRT18P22-201ENST00000402024 1347 ntBASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.68■■□□□ 1.06
NIPA1Q7RTP0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NIPA1Q7RTP0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms