Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 AC133681.1-201ENST00000465482 601 ntBASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 AC004264.1-201ENST00000608354 794 ntBASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP1BQ7LBR1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 NBPF21P-201ENST00000425093 1451 ntBASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 AC020907.5-201ENST00000624372 1936 ntBASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP1BQ7LBR1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 AC008550.1-201ENST00000511500 884 ntBASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP1BQ7LBR1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHMP1BQ7LBR1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms