Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF111Q6ZNA4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF111Q6ZNA4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 FZD10-202ENST00000539839 3282 ntBASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 AC009237.14-201ENST00000609975 1594 ntBASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 AC079598.2-202ENST00000546624 1451 ntBASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF111Q6ZNA4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 KRT18P6-201ENST00000555540 1265 ntBASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 HLA-B-256ENST00000639848 1089 ntBASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF111Q6ZNA4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF111Q6ZNA4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms