Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 AC091874.3-201ENST00000512672 1195 ntBASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 AC142381.4-202ENST00000563973 229 ntBASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXR1Q6PIV2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXR1Q6PIV2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 LSM12P1-201ENST00000411836 588 ntBASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 MYC-209ENST00000641252 345 ntBASIC20.08■□□□□ 0.81
FOXR1Q6PIV2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.08■□□□□ 0.8
FOXR1Q6PIV2 RBM17P2-201ENST00000616397 1405 ntBASIC20.08■□□□□ 0.8
FOXR1Q6PIV2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR1Q6PIV2 AC061975.6-201ENST00000579045 1553 ntBASIC20.08■□□□□ 0.8
FOXR1Q6PIV2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXR1Q6PIV2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 AC020763.4-201ENST00000623414 4170 ntBASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 GCSHP5-201ENST00000443090 522 ntBASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 AC128676.1-201ENST00000454392 318 ntBASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.07■□□□□ 0.8
FOXR1Q6PIV2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 KRT16P2-201ENST00000414673 1423 ntBASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXR1Q6PIV2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms