Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RPS2P52-201ENST00000469610 820 ntBASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 RAP2CP1-201ENST00000605103 478 ntBASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRIF1Q5T3J3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRIF1Q5T3J3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 Z98044.1-201ENST00000632503 1764 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 IRX1P1-201ENST00000438849 1838 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 MIPEPP3-201ENST00000412105 444 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 AC006557.6-201ENST00000623071 864 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 AP006587.1-201ENST00000534129 1502 ntBASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.22■□□□□ 0.51
LRIF1Q5T3J3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 MIR663A-201ENST00000385250 93 ntBASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 AC026185.1-201ENST00000445748 174 ntBASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 AC092118.2-201ENST00000613495 667 ntBASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRIF1Q5T3J3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms