Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 AC069152.1-201ENST00000438030 544 ntBASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SOX15-203ENST00000570788 1093 ntBASIC18.79■□□□□ 0.6
SGO1Q5FBB7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SGO1Q5FBB7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 AL020996.1-203ENST00000536896 2307 ntBASIC18.78■□□□□ 0.6
SGO1Q5FBB7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
SGO1Q5FBB7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AL355802.2-201ENST00000402069 882 ntBASIC18.77■□□□□ 0.6
SGO1Q5FBB7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.77■□□□□ 0.6
SGO1Q5FBB7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AC120498.8-201ENST00000614275 531 ntBASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AL121906.2-201ENST00000621597 723 ntBASIC18.77■□□□□ 0.6
SGO1Q5FBB7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AP006587.1-201ENST00000534129 1502 ntBASIC18.77■□□□□ 0.6
SGO1Q5FBB7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.77■□□□□ 0.6
SGO1Q5FBB7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SGO1Q5FBB7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.76■□□□□ 0.59
SGO1Q5FBB7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 AC090340.1-201ENST00000620778 4980 ntBASIC18.76■□□□□ 0.59
SGO1Q5FBB7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.76■□□□□ 0.59
SGO1Q5FBB7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms