Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL20P78556 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 AC091799.1-201ENST00000422823 811 ntBASIC15.23■□□□□ 0.03
CCL20P78556 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL20P78556 AC126544.1-201ENST00000580842 1059 ntBASIC15.23■□□□□ 0.03
CCL20P78556 AC120498.10-201ENST00000621827 505 ntBASIC15.23■□□□□ 0.03
CCL20P78556 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL20P78556 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL20P78556 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL20P78556 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCL20P78556 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL20P78556 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL20P78556 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL20P78556 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL20P78556 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL20P78556 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL20P78556 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL20P78556 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL20P78556 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL20P78556 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL20P78556 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.21■□□□□ 0.03
CCL20P78556 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL20P78556 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CCL20P78556 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL20P78556 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL20P78556 AC009299.2-201ENST00000482477 511 ntBASIC15.21■□□□□ 0.03
CCL20P78556 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL20P78556 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 AC233992.3-201ENST00000607491 485 ntBASIC15.21■□□□□ 0.03
CCL20P78556 LINC00896-202ENST00000609602 2128 ntBASIC15.21■□□□□ 0.03
CCL20P78556 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.21■□□□□ 0.03
CCL20P78556 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL20P78556 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL20P78556 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms