Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.71■□□□□ 0.11
SPCS3P61009 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SPCS3P61009 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS3P61009 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS3P61009 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS3P61009 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS3P61009 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.71■□□□□ 0.1
SPCS3P61009 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS3P61009 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.71■□□□□ 0.1
SPCS3P61009 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.7■□□□□ 0.1
SPCS3P61009 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 DUX4L16-201ENST00000555130 1264 ntBASIC15.7■□□□□ 0.1
SPCS3P61009 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS3P61009 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.7■□□□□ 0.1
SPCS3P61009 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS3P61009 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPCS3P61009 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 AL138781.2-201ENST00000617896 1843 ntBASIC15.69■□□□□ 0.1
SPCS3P61009 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPCS3P61009 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
SPCS3P61009 AC016769.1-201ENST00000409132 1010 ntBASIC15.69■□□□□ 0.1
SPCS3P61009 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SPCS3P61009 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.69■□□□□ 0.1
SPCS3P61009 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.69■□□□□ 0.1
SPCS3P61009 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.69■□□□□ 0.1
SPCS3P61009 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SPCS3P61009 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS3P61009 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 AL355472.2-201ENST00000422958 438 ntBASIC15.68■□□□□ 0.1
SPCS3P61009 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.68■□□□□ 0.1
SPCS3P61009 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.68■□□□□ 0.1
SPCS3P61009 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.68■□□□□ 0.1
SPCS3P61009 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms