Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
EIF3EP60228 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
EIF3EP60228 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
EIF3EP60228 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.95■□□□□ 0.78
EIF3EP60228 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EIF3EP60228 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.95■□□□□ 0.78
EIF3EP60228 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EIF3EP60228 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 KRT18P16-201ENST00000510337 1294 ntBASIC19.95■□□□□ 0.78
EIF3EP60228 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.95■□□□□ 0.78
EIF3EP60228 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EIF3EP60228 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 SDHAP1-207ENST00000440850 2000 ntBASIC19.95■□□□□ 0.78
EIF3EP60228 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
EIF3EP60228 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
EIF3EP60228 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
EIF3EP60228 AC093503.3-201ENST00000624917 2352 ntBASIC19.94■□□□□ 0.78
EIF3EP60228 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
EIF3EP60228 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 AL355802.2-201ENST00000402069 882 ntBASIC19.94■□□□□ 0.78
EIF3EP60228 UNC93B4-201ENST00000505679 747 ntBASIC19.94■□□□□ 0.78
EIF3EP60228 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.94■□□□□ 0.78
EIF3EP60228 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
EIF3EP60228 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.94■□□□□ 0.78
EIF3EP60228 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
EIF3EP60228 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
EIF3EP60228 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EIF3EP60228 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.93■□□□□ 0.78
EIF3EP60228 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EIF3EP60228 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
EIF3EP60228 TUBB8P6-201ENST00000436895 1288 ntBASIC19.93■□□□□ 0.78
EIF3EP60228 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EIF3EP60228 AL049812.1-201ENST00000432563 2267 ntBASIC19.93■□□□□ 0.78
EIF3EP60228 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EIF3EP60228 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EIF3EP60228 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.93■□□□□ 0.78
EIF3EP60228 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EIF3EP60228 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EIF3EP60228 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EIF3EP60228 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EIF3EP60228 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EIF3EP60228 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.92■□□□□ 0.78
EIF3EP60228 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.92■□□□□ 0.78
EIF3EP60228 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
EIF3EP60228 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EIF3EP60228 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
EIF3EP60228 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.92■□□□□ 0.78
EIF3EP60228 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms