Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB38P57729 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 Z82202.1-201ENST00000623446 1880 ntBASIC18.21■□□□□ 0.51
RAB38P57729 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RAB38P57729 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RAB38P57729 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.21■□□□□ 0.51
RAB38P57729 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.21■□□□□ 0.51
RAB38P57729 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.21■□□□□ 0.51
RAB38P57729 AC026271.3-201ENST00000571884 352 ntBASIC18.21■□□□□ 0.51
RAB38P57729 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB38P57729 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
RAB38P57729 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB38P57729 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.21■□□□□ 0.51
RAB38P57729 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB38P57729 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB38P57729 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAB38P57729 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB38P57729 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB38P57729 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
RAB38P57729 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.2■□□□□ 0.5
RAB38P57729 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB38P57729 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.2■□□□□ 0.5
RAB38P57729 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
RAB38P57729 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAB38P57729 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB38P57729 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB38P57729 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB38P57729 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB38P57729 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB38P57729 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.19■□□□□ 0.5
RAB38P57729 Z85996.1-201ENST00000494644 937 ntBASIC18.19■□□□□ 0.5
RAB38P57729 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB38P57729 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RAB38P57729 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB38P57729 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB38P57729 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB38P57729 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 SDHAP1-207ENST00000440850 2000 ntBASIC18.18■□□□□ 0.5
RAB38P57729 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
RAB38P57729 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB38P57729 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RAB38P57729 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RAB38P57729 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB38P57729 SNORA78-201ENST00000459373 127 ntBASIC18.18■□□□□ 0.5
RAB38P57729 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB38P57729 NUDT16P1-203ENST00000513809 620 ntBASIC18.18■□□□□ 0.5
RAB38P57729 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB38P57729 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB38P57729 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB38P57729 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB38P57729 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms