Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SLC25A1P53007 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.19■□□□□ 0.34
SLC25A1P53007 AC120498.8-201ENST00000614275 531 ntBASIC17.19■□□□□ 0.34
SLC25A1P53007 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC25A1P53007 AL121829.2-201ENST00000620908 328 ntBASIC17.19■□□□□ 0.34
SLC25A1P53007 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.19■□□□□ 0.34
SLC25A1P53007 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC25A1P53007 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC25A1P53007 FP475955.4-201ENST00000623131 1990 ntBASIC17.19■□□□□ 0.34
SLC25A1P53007 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC25A1P53007 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC25A1P53007 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC25A1P53007 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC25A1P53007 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC25A1P53007 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC25A1P53007 AC092666.2-201ENST00000613287 246 ntBASIC17.18■□□□□ 0.34
SLC25A1P53007 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC25A1P53007 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC25A1P53007 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC25A1P53007 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC25A1P53007 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SLC25A1P53007 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC25A1P53007 TUBB8P6-201ENST00000436895 1288 ntBASIC17.17■□□□□ 0.34
SLC25A1P53007 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC25A1P53007 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.17■□□□□ 0.34
SLC25A1P53007 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.17■□□□□ 0.34
SLC25A1P53007 AC093525.10-201ENST00000625130 1569 ntBASIC17.17■□□□□ 0.34
SLC25A1P53007 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC25A1P53007 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC25A1P53007 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC25A1P53007 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC25A1P53007 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC25A1P53007 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC25A1P53007 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC25A1P53007 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC25A1P53007 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC25A1P53007 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms