Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.79■□□□□ 0.6
PDX1P52945 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.79■□□□□ 0.6
PDX1P52945 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDX1P52945 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.79■□□□□ 0.6
PDX1P52945 AC008040.2-201ENST00000461049 708 ntBASIC18.79■□□□□ 0.6
PDX1P52945 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PDX1P52945 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.79■□□□□ 0.6
PDX1P52945 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.79■□□□□ 0.6
PDX1P52945 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.79■□□□□ 0.6
PDX1P52945 HLA-A-209ENST00000638375 975 ntBASIC18.79■□□□□ 0.6
PDX1P52945 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDX1P52945 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 RCC2P6-201ENST00000526625 1557 ntBASIC18.79■□□□□ 0.6
PDX1P52945 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PDX1P52945 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PDX1P52945 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.79■□□□□ 0.6
PDX1P52945 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PDX1P52945 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDX1P52945 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDX1P52945 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 PHGDH-210ENST00000641115 1638 ntBASIC18.78■□□□□ 0.6
PDX1P52945 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 AC131212.4-201ENST00000623606 975 ntBASIC18.78■□□□□ 0.6
PDX1P52945 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDX1P52945 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.78■□□□□ 0.6
PDX1P52945 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDX1P52945 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDX1P52945 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PDX1P52945 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PDX1P52945 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.77■□□□□ 0.6
PDX1P52945 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.77■□□□□ 0.6
PDX1P52945 AC087388.1-201ENST00000571370 1112 ntBASIC18.77■□□□□ 0.6
PDX1P52945 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 AP000692.2-201ENST00000608391 879 ntBASIC18.77■□□□□ 0.6
PDX1P52945 AC130371.2-201ENST00000619443 611 ntBASIC18.77■□□□□ 0.6
PDX1P52945 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.77■□□□□ 0.6
PDX1P52945 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.77■□□□□ 0.6
PDX1P52945 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDX1P52945 AIRN-201ENST00000601203 4374 ntBASIC18.77■□□□□ 0.6
PDX1P52945 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
PDX1P52945 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.76■□□□□ 0.59
PDX1P52945 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.76■□□□□ 0.59
PDX1P52945 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.76■□□□□ 0.59
PDX1P52945 LIN28AP1-201ENST00000429574 405 ntBASIC18.76■□□□□ 0.59
PDX1P52945 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDX1P52945 ATP5G1P1-201ENST00000448724 379 ntBASIC18.76■□□□□ 0.59
PDX1P52945 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms