Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF140P52738 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.28■□□□□ 0.68
ZNF140P52738 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF140P52738 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZNF140P52738 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF140P52738 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF140P52738 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF140P52738 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF140P52738 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF140P52738 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF140P52738 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.27■□□□□ 0.68
ZNF140P52738 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF140P52738 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF140P52738 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF140P52738 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF140P52738 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
ZNF140P52738 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF140P52738 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF140P52738 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF140P52738 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
ZNF140P52738 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF140P52738 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ZNF140P52738 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF140P52738 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF140P52738 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF140P52738 AL353807.1-201ENST00000427475 662 ntBASIC19.26■□□□□ 0.67
ZNF140P52738 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 AL158047.1-201ENST00000445918 881 ntBASIC19.26■□□□□ 0.67
ZNF140P52738 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF140P52738 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF140P52738 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ZNF140P52738 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF140P52738 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF140P52738 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF140P52738 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF140P52738 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF140P52738 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF140P52738 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 AP002982.1-201ENST00000492365 877 ntBASIC19.25■□□□□ 0.67
ZNF140P52738 Z85996.1-201ENST00000494644 937 ntBASIC19.25■□□□□ 0.67
ZNF140P52738 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 AF186192.3-201ENST00000583427 947 ntBASIC19.25■□□□□ 0.67
ZNF140P52738 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF140P52738 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF140P52738 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF140P52738 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF140P52738 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZNF140P52738 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF140P52738 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF140P52738 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF140P52738 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF140P52738 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF140P52738 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ZNF140P52738 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms