Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN2P51788 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN2P51788 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN2P51788 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN2P51788 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN2P51788 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN2P51788 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLCN2P51788 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLCN2P51788 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCN2P51788 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCN2P51788 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN2P51788 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN2P51788 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN2P51788 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLCN2P51788 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN2P51788 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLCN2P51788 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLCN2P51788 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 NOC2LP1-202ENST00000452600 2235 ntBASIC18.7■□□□□ 0.58
CLCN2P51788 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN2P51788 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 AP000997.3-201ENST00000623333 2250 ntBASIC18.7■□□□□ 0.58
CLCN2P51788 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.7■□□□□ 0.58
CLCN2P51788 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.7■□□□□ 0.58
CLCN2P51788 KRT17P3-201ENST00000420566 1262 ntBASIC18.7■□□□□ 0.58
CLCN2P51788 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CLCN2P51788 AC023632.3-201ENST00000521633 145 ntBASIC18.7■□□□□ 0.58
CLCN2P51788 AC008403.3-201ENST00000598924 454 ntBASIC18.7■□□□□ 0.58
CLCN2P51788 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.7■□□□□ 0.58
CLCN2P51788 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CLCN2P51788 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLCN2P51788 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLCN2P51788 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN2P51788 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN2P51788 AC106820.2-201ENST00000563775 3264 ntBASIC18.69■□□□□ 0.58
CLCN2P51788 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN2P51788 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.69■□□□□ 0.58
CLCN2P51788 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 AC008687.6-201ENST00000596318 630 ntBASIC18.69■□□□□ 0.58
CLCN2P51788 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLCN2P51788 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCN2P51788 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCN2P51788 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN2P51788 AC007613.1-201ENST00000572811 2597 ntBASIC18.68■□□□□ 0.58
CLCN2P51788 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN2P51788 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN2P51788 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN2P51788 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN2P51788 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLCN2P51788 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms