Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RNF144AP50876 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF144AP50876 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.97■□□□□ 0.47
RNF144AP50876 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.97■□□□□ 0.47
RNF144AP50876 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 AP000974.1-201ENST00000623909 2387 ntBASIC17.96■□□□□ 0.47
RNF144AP50876 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.96■□□□□ 0.47
RNF144AP50876 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF144AP50876 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 AC006058.3-201ENST00000606217 1069 ntBASIC17.96■□□□□ 0.47
RNF144AP50876 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.96■□□□□ 0.47
RNF144AP50876 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RNF144AP50876 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RNF144AP50876 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RNF144AP50876 AL032819.2-201ENST00000624543 2162 ntBASIC17.96■□□□□ 0.46
RNF144AP50876 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RNF144AP50876 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RNF144AP50876 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
RNF144AP50876 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF144AP50876 AL023875.1-201ENST00000640777 796 ntBASIC17.95■□□□□ 0.46
RNF144AP50876 LINC01465-201ENST00000408887 1940 ntBASIC17.95■□□□□ 0.46
RNF144AP50876 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF144AP50876 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF144AP50876 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF144AP50876 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF144AP50876 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RNF144AP50876 TSPY20P-201ENST00000450910 630 ntBASIC17.94■□□□□ 0.46
RNF144AP50876 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF144AP50876 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF144AP50876 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF144AP50876 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF144AP50876 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF144AP50876 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF144AP50876 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 TNXA-203ENST00000507684 2038 ntBASIC17.93■□□□□ 0.46
RNF144AP50876 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF144AP50876 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF144AP50876 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF144AP50876 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF144AP50876 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF144AP50876 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms