Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPT1AP50416 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CPT1AP50416 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPT1AP50416 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPT1AP50416 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPT1AP50416 AP005212.1-201ENST00000581547 1997 ntBASIC21.48■■□□□ 1.03
CPT1AP50416 IER3-202ENST00000376377 1350 ntBASIC21.48■■□□□ 1.03
CPT1AP50416 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CPT1AP50416 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CPT1AP50416 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.47■■□□□ 1.03
CPT1AP50416 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.47■■□□□ 1.03
CPT1AP50416 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CPT1AP50416 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPT1AP50416 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.46■■□□□ 1.03
CPT1AP50416 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.46■■□□□ 1.03
CPT1AP50416 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
CPT1AP50416 NEK4P2-201ENST00000580004 1012 ntBASIC21.46■■□□□ 1.03
CPT1AP50416 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPT1AP50416 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.46■■□□□ 1.03
CPT1AP50416 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
CPT1AP50416 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CPT1AP50416 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.45■■□□□ 1.02
CPT1AP50416 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.45■■□□□ 1.02
CPT1AP50416 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.45■■□□□ 1.02
CPT1AP50416 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.45■■□□□ 1.02
CPT1AP50416 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CPT1AP50416 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.45■■□□□ 1.02
CPT1AP50416 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.45■■□□□ 1.02
CPT1AP50416 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.45■■□□□ 1.02
CPT1AP50416 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.45■■□□□ 1.02
CPT1AP50416 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.45■■□□□ 1.02
CPT1AP50416 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CPT1AP50416 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.45■■□□□ 1.02
CPT1AP50416 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPT1AP50416 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.44■■□□□ 1.02
CPT1AP50416 AL162377.1-201ENST00000618844 1793 ntBASIC21.44■■□□□ 1.02
CPT1AP50416 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.44■■□□□ 1.02
CPT1AP50416 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.44■■□□□ 1.02
CPT1AP50416 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.44■■□□□ 1.02
CPT1AP50416 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CPT1AP50416 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.43■■□□□ 1.02
CPT1AP50416 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CPT1AP50416 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 KRT18P56-201ENST00000507275 550 ntBASIC21.43■■□□□ 1.02
CPT1AP50416 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.43■■□□□ 1.02
CPT1AP50416 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.43■■□□□ 1.02
CPT1AP50416 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.43■■□□□ 1.02
CPT1AP50416 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.43■■□□□ 1.02
CPT1AP50416 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.43■■□□□ 1.02
CPT1AP50416 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CPT1AP50416 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CPT1AP50416 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPT1AP50416 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPT1AP50416 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPT1AP50416 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms