Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.13■□□□□ 0.33
SRP9P49458 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SRP9P49458 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SRP9P49458 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SRP9P49458 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.13■□□□□ 0.33
SRP9P49458 AC098934.4-201ENST00000564127 592 ntBASIC17.13■□□□□ 0.33
SRP9P49458 MYC-209ENST00000641252 345 ntBASIC17.13■□□□□ 0.33
SRP9P49458 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SRP9P49458 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.13■□□□□ 0.33
SRP9P49458 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
SRP9P49458 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SRP9P49458 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRP9P49458 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SRP9P49458 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.12■□□□□ 0.33
SRP9P49458 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.12■□□□□ 0.33
SRP9P49458 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRP9P49458 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRP9P49458 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SRP9P49458 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP9P49458 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.11■□□□□ 0.33
SRP9P49458 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.11■□□□□ 0.33
SRP9P49458 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SRP9P49458 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SRP9P49458 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRP9P49458 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRP9P49458 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRP9P49458 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SRP9P49458 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms