Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CTSKP43235 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CTSKP43235 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTSKP43235 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTSKP43235 AC008040.2-201ENST00000461049 708 ntBASIC19.25■□□□□ 0.67
CTSKP43235 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.25■□□□□ 0.67
CTSKP43235 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CTSKP43235 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 AC011298.2-201ENST00000617989 482 ntBASIC19.25■□□□□ 0.67
CTSKP43235 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CTSKP43235 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSKP43235 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CTSKP43235 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.24■□□□□ 0.67
CTSKP43235 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 AC004951.3-201ENST00000418645 1148 ntBASIC19.24■□□□□ 0.67
CTSKP43235 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSKP43235 BX664615.1-201ENST00000443558 458 ntBASIC19.24■□□□□ 0.67
CTSKP43235 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.24■□□□□ 0.67
CTSKP43235 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CTSKP43235 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
CTSKP43235 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.24■□□□□ 0.67
CTSKP43235 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTSKP43235 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTSKP43235 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTSKP43235 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CTSKP43235 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSKP43235 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSKP43235 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CTSKP43235 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CTSKP43235 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CTSKP43235 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.23■□□□□ 0.67
CTSKP43235 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.23■□□□□ 0.67
CTSKP43235 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTSKP43235 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.23■□□□□ 0.67
CTSKP43235 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 AL391422.3-201ENST00000603791 2761 ntBASIC19.23■□□□□ 0.67
CTSKP43235 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CTSKP43235 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTSKP43235 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTSKP43235 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.22■□□□□ 0.67
CTSKP43235 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 HMGA1P5-201ENST00000412453 271 ntBASIC19.22■□□□□ 0.67
CTSKP43235 AK4P3-201ENST00000418260 669 ntBASIC19.22■□□□□ 0.67
CTSKP43235 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.22■□□□□ 0.67
CTSKP43235 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTSKP43235 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.22■□□□□ 0.67
CTSKP43235 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTSKP43235 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTSKP43235 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 AC096733.2-201ENST00000609937 1394 ntBASIC19.21■□□□□ 0.67
CTSKP43235 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTSKP43235 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.21■□□□□ 0.67
CTSKP43235 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 MFAP1P1-201ENST00000442257 1255 ntBASIC19.21■□□□□ 0.67
CTSKP43235 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.21■□□□□ 0.67
CTSKP43235 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.21■□□□□ 0.67
CTSKP43235 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.21■□□□□ 0.67
CTSKP43235 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms