Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 AP003097.1-201ENST00000530657 1135 ntBASIC20.34■□□□□ 0.85
PCK1P35558 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCK1P35558 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCK1P35558 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PCK1P35558 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.34■□□□□ 0.85
PCK1P35558 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCK1P35558 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.33■□□□□ 0.85
PCK1P35558 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCK1P35558 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.33■□□□□ 0.85
PCK1P35558 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCK1P35558 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.33■□□□□ 0.85
PCK1P35558 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCK1P35558 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCK1P35558 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCK1P35558 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.33■□□□□ 0.85
PCK1P35558 KRT18P6-201ENST00000555540 1265 ntBASIC20.33■□□□□ 0.85
PCK1P35558 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCK1P35558 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.33■□□□□ 0.85
PCK1P35558 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.33■□□□□ 0.85
PCK1P35558 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
PCK1P35558 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCK1P35558 KRT8P8-201ENST00000434750 1448 ntBASIC20.33■□□□□ 0.84
PCK1P35558 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCK1P35558 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCK1P35558 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 AC026471.1-201ENST00000564629 3026 ntBASIC20.32■□□□□ 0.84
PCK1P35558 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 AL032819.2-201ENST00000624543 2162 ntBASIC20.32■□□□□ 0.84
PCK1P35558 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.32■□□□□ 0.84
PCK1P35558 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.32■□□□□ 0.84
PCK1P35558 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.32■□□□□ 0.84
PCK1P35558 AC026366.1-201ENST00000488803 879 ntBASIC20.32■□□□□ 0.84
PCK1P35558 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.32■□□□□ 0.84
PCK1P35558 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.32■□□□□ 0.84
PCK1P35558 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.32■□□□□ 0.84
PCK1P35558 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCK1P35558 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.32■□□□□ 0.84
PCK1P35558 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCK1P35558 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
PCK1P35558 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PCK1P35558 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCK1P35558 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
PCK1P35558 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.31■□□□□ 0.84
PCK1P35558 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.31■□□□□ 0.84
PCK1P35558 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 AC018445.3-201ENST00000624177 1945 ntBASIC20.31■□□□□ 0.84
PCK1P35558 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCK1P35558 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCK1P35558 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
PCK1P35558 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 ZNF815P-204ENST00000434898 1737 ntBASIC20.3■□□□□ 0.84
PCK1P35558 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.3■□□□□ 0.84
PCK1P35558 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.3■□□□□ 0.84
PCK1P35558 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.3■□□□□ 0.84
PCK1P35558 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.3■□□□□ 0.84
PCK1P35558 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCK1P35558 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms