Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD58P19256 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.78■□□□□ 0.92
CD58P19256 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.78■□□□□ 0.92
CD58P19256 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD58P19256 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD58P19256 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD58P19256 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.77■□□□□ 0.92
CD58P19256 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.77■□□□□ 0.92
CD58P19256 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.77■□□□□ 0.92
CD58P19256 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CD58P19256 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CD58P19256 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.77■□□□□ 0.92
CD58P19256 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.77■□□□□ 0.92
CD58P19256 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.77■□□□□ 0.92
CD58P19256 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.77■□□□□ 0.92
CD58P19256 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.77■□□□□ 0.92
CD58P19256 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD58P19256 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CD58P19256 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
CD58P19256 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CD58P19256 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.77■□□□□ 0.91
CD58P19256 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.77■□□□□ 0.91
CD58P19256 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CD58P19256 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.76■□□□□ 0.91
CD58P19256 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.76■□□□□ 0.91
CD58P19256 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.76■□□□□ 0.91
CD58P19256 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CD58P19256 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 AC093484.2-201ENST00000580996 2166 ntBASIC20.76■□□□□ 0.91
CD58P19256 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CD58P19256 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD58P19256 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.75■□□□□ 0.91
CD58P19256 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD58P19256 Z82202.1-201ENST00000623446 1880 ntBASIC20.75■□□□□ 0.91
CD58P19256 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.75■□□□□ 0.91
CD58P19256 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.75■□□□□ 0.91
CD58P19256 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.75■□□□□ 0.91
CD58P19256 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.75■□□□□ 0.91
CD58P19256 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 AP002982.1-201ENST00000492365 877 ntBASIC20.75■□□□□ 0.91
CD58P19256 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 RARRES2P10-201ENST00000564312 460 ntBASIC20.75■□□□□ 0.91
CD58P19256 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.75■□□□□ 0.91
CD58P19256 HLA-A-209ENST00000638375 975 ntBASIC20.75■□□□□ 0.91
CD58P19256 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CD58P19256 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CD58P19256 ZNF815P-204ENST00000434898 1737 ntBASIC20.75■□□□□ 0.91
CD58P19256 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.75■□□□□ 0.91
CD58P19256 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
CD58P19256 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CD58P19256 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.74■□□□□ 0.91
CD58P19256 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.74■□□□□ 0.91
CD58P19256 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CD58P19256 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.74■□□□□ 0.91
CD58P19256 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.74■□□□□ 0.91
CD58P19256 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.74■□□□□ 0.91
CD58P19256 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CD58P19256 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CD58P19256 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.74■□□□□ 0.91
CD58P19256 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD58P19256 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.73■□□□□ 0.91
CD58P19256 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD58P19256 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CD58P19256 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.73■□□□□ 0.91
CD58P19256 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CD58P19256 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms