Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.16■□□□□ 0.18
ATF4P18848 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ATF4P18848 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF4P18848 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATF4P18848 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF4P18848 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ATF4P18848 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
ATF4P18848 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ATF4P18848 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
ATF4P18848 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
ATF4P18848 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.15■□□□□ 0.18
ATF4P18848 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ATF4P18848 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF4P18848 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ATF4P18848 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 AC003102.1-202ENST00000563394 1796 ntBASIC16.15■□□□□ 0.18
ATF4P18848 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF4P18848 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ATF4P18848 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.14■□□□□ 0.18
ATF4P18848 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATF4P18848 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.14■□□□□ 0.17
ATF4P18848 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.14■□□□□ 0.17
ATF4P18848 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ATF4P18848 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.14■□□□□ 0.17
ATF4P18848 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 AC097381.1-201ENST00000429019 1296 ntBASIC16.14■□□□□ 0.17
ATF4P18848 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.14■□□□□ 0.17
ATF4P18848 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.14■□□□□ 0.17
ATF4P18848 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.14■□□□□ 0.17
ATF4P18848 AC233992.3-201ENST00000607491 485 ntBASIC16.14■□□□□ 0.17
ATF4P18848 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATF4P18848 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ATF4P18848 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.14■□□□□ 0.17
ATF4P18848 AP006587.3-201ENST00000525742 1516 ntBASIC16.14■□□□□ 0.17
ATF4P18848 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF4P18848 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATF4P18848 AC067852.2-201ENST00000590513 2313 ntBASIC16.13■□□□□ 0.17
ATF4P18848 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
ATF4P18848 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.13■□□□□ 0.17
ATF4P18848 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.13■□□□□ 0.17
ATF4P18848 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.13■□□□□ 0.17
ATF4P18848 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.13■□□□□ 0.17
ATF4P18848 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.13■□□□□ 0.17
ATF4P18848 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ATF4P18848 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.13■□□□□ 0.17
ATF4P18848 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
ATF4P18848 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATF4P18848 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.13■□□□□ 0.17
ATF4P18848 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms