Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.92■□□□□ 0.78
ERCC2P18074 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.92■□□□□ 0.78
ERCC2P18074 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.92■□□□□ 0.78
ERCC2P18074 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ERCC2P18074 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.92■□□□□ 0.78
ERCC2P18074 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.92■□□□□ 0.78
ERCC2P18074 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.92■□□□□ 0.78
ERCC2P18074 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.92■□□□□ 0.78
ERCC2P18074 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.92■□□□□ 0.78
ERCC2P18074 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.91■□□□□ 0.78
ERCC2P18074 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ERCC2P18074 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.91■□□□□ 0.78
ERCC2P18074 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.91■□□□□ 0.78
ERCC2P18074 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.91■□□□□ 0.78
ERCC2P18074 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.91■□□□□ 0.78
ERCC2P18074 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.91■□□□□ 0.78
ERCC2P18074 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.91■□□□□ 0.78
ERCC2P18074 TMEM191A-211ENST00000637163 1067 ntBASIC19.91■□□□□ 0.78
ERCC2P18074 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
ERCC2P18074 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
ERCC2P18074 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ERCC2P18074 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.91■□□□□ 0.78
ERCC2P18074 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ERCC2P18074 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC2P18074 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ERCC2P18074 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ERCC2P18074 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
ERCC2P18074 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ERCC2P18074 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.9■□□□□ 0.78
ERCC2P18074 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 RARRES2P10-201ENST00000564312 460 ntBASIC19.9■□□□□ 0.78
ERCC2P18074 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.9■□□□□ 0.78
ERCC2P18074 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.9■□□□□ 0.78
ERCC2P18074 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.9■□□□□ 0.78
ERCC2P18074 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC2P18074 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.9■□□□□ 0.78
ERCC2P18074 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ERCC2P18074 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ERCC2P18074 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ERCC2P18074 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.89■□□□□ 0.77
ERCC2P18074 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.89■□□□□ 0.77
ERCC2P18074 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC2P18074 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.89■□□□□ 0.77
ERCC2P18074 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC2P18074 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
ERCC2P18074 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
ERCC2P18074 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.89■□□□□ 0.77
ERCC2P18074 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC2P18074 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ERCC2P18074 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms