Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PRKCAP17252 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.88■□□□□ 0.45
PRKCAP17252 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRKCAP17252 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.88■□□□□ 0.45
PRKCAP17252 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.87■□□□□ 0.45
PRKCAP17252 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PRKCAP17252 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PRKCAP17252 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PRKCAP17252 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PRKCAP17252 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PRKCAP17252 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.87■□□□□ 0.45
PRKCAP17252 AC233263.1-201ENST00000578059 224 ntBASIC17.87■□□□□ 0.45
PRKCAP17252 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.87■□□□□ 0.45
PRKCAP17252 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 NOC2LP1-202ENST00000452600 2235 ntBASIC17.87■□□□□ 0.45
PRKCAP17252 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PRKCAP17252 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.87■□□□□ 0.45
PRKCAP17252 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.87■□□□□ 0.45
PRKCAP17252 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRKCAP17252 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PRKCAP17252 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 AC125437.2-201ENST00000625180 2167 ntBASIC17.86■□□□□ 0.45
PRKCAP17252 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.86■□□□□ 0.45
PRKCAP17252 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.86■□□□□ 0.45
PRKCAP17252 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.86■□□□□ 0.45
PRKCAP17252 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.86■□□□□ 0.45
PRKCAP17252 AC006058.3-201ENST00000606217 1069 ntBASIC17.86■□□□□ 0.45
PRKCAP17252 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 FZD10-202ENST00000539839 3282 ntBASIC17.86■□□□□ 0.45
PRKCAP17252 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRKCAP17252 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.86■□□□□ 0.45
PRKCAP17252 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.85■□□□□ 0.45
PRKCAP17252 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PRKCAP17252 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRKCAP17252 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms