Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.68■■□□□ 1.06
TPM3P06753 AC010536.3-201ENST00000620306 533 ntBASIC21.68■■□□□ 1.06
TPM3P06753 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TPM3P06753 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TPM3P06753 WIZP1-201ENST00000531444 2299 ntBASIC21.67■■□□□ 1.06
TPM3P06753 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM3P06753 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TPM3P06753 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 MCRIP2P1-201ENST00000394346 511 ntBASIC21.67■■□□□ 1.06
TPM3P06753 AC100791.3-201ENST00000617619 330 ntBASIC21.67■■□□□ 1.06
TPM3P06753 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM3P06753 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TPM3P06753 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM3P06753 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM3P06753 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TPM3P06753 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 AC007322.4-201ENST00000509611 723 ntBASIC21.66■■□□□ 1.06
TPM3P06753 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.66■■□□□ 1.06
TPM3P06753 MFSD11-216ENST00000590393 1141 ntBASIC21.66■■□□□ 1.06
TPM3P06753 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TPM3P06753 AC013268.1-206ENST00000638368 961 ntBASIC21.66■■□□□ 1.06
TPM3P06753 AC112229.1-201ENST00000639295 961 ntBASIC21.66■■□□□ 1.06
TPM3P06753 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TPM3P06753 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.66■■□□□ 1.06
TPM3P06753 AL031598.1-201ENST00000561511 1773 ntBASIC21.66■■□□□ 1.06
TPM3P06753 Z98044.1-201ENST00000632503 1764 ntBASIC21.66■■□□□ 1.06
TPM3P06753 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TPM3P06753 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM3P06753 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 AC093525.10-201ENST00000625130 1569 ntBASIC21.65■■□□□ 1.06
TPM3P06753 AL133373.2-201ENST00000623187 2828 ntBASIC21.65■■□□□ 1.06
TPM3P06753 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.65■■□□□ 1.06
TPM3P06753 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TPM3P06753 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TPM3P06753 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.65■■□□□ 1.06
TPM3P06753 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TPM3P06753 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.65■■□□□ 1.06
TPM3P06753 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.65■■□□□ 1.06
TPM3P06753 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TPM3P06753 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.65■■□□□ 1.06
TPM3P06753 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM3P06753 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TPM3P06753 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.64■■□□□ 1.06
TPM3P06753 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TPM3P06753 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.64■■□□□ 1.06
TPM3P06753 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms