Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.3■■□□□ 1.32
CHGBP05060 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CHGBP05060 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.3■■□□□ 1.32
CHGBP05060 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.3■■□□□ 1.32
CHGBP05060 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.3■■□□□ 1.32
CHGBP05060 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.29■■□□□ 1.32
CHGBP05060 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CHGBP05060 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.29■■□□□ 1.32
CHGBP05060 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CHGBP05060 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.29■■□□□ 1.32
CHGBP05060 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CHGBP05060 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 AL355355.2-201ENST00000442321 338 ntBASIC23.29■■□□□ 1.32
CHGBP05060 AC091390.4-202ENST00000476426 537 ntBASIC23.29■■□□□ 1.32
CHGBP05060 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CHGBP05060 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.29■■□□□ 1.32
CHGBP05060 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.29■■□□□ 1.32
CHGBP05060 AL160286.2-201ENST00000567150 934 ntBASIC23.29■■□□□ 1.32
CHGBP05060 MIR4785-201ENST00000585005 73 ntBASIC23.29■■□□□ 1.32
CHGBP05060 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
CHGBP05060 AP000525.1-201ENST00000608286 694 ntBASIC23.29■■□□□ 1.32
CHGBP05060 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CHGBP05060 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.29■■□□□ 1.32
CHGBP05060 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.29■■□□□ 1.32
CHGBP05060 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.29■■□□□ 1.32
CHGBP05060 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CHGBP05060 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CHGBP05060 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CHGBP05060 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.28■■□□□ 1.32
CHGBP05060 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.28■■□□□ 1.32
CHGBP05060 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 MIR6786-201ENST00000616843 113 ntBASIC23.28■■□□□ 1.32
CHGBP05060 AL031985.4-201ENST00000642138 673 ntBASIC23.28■■□□□ 1.32
CHGBP05060 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CHGBP05060 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.28■■□□□ 1.32
CHGBP05060 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.28■■□□□ 1.32
CHGBP05060 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.28■■□□□ 1.32
CHGBP05060 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CHGBP05060 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CHGBP05060 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.27■■□□□ 1.32
CHGBP05060 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.27■■□□□ 1.32
CHGBP05060 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CHGBP05060 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CHGBP05060 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHGBP05060 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CHGBP05060 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CHGBP05060 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CHGBP05060 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CHGBP05060 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CHGBP05060 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CHGBP05060 AC130371.2-201ENST00000619443 611 ntBASIC23.26■■□□□ 1.31
CHGBP05060 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.26■■□□□ 1.31
CHGBP05060 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CHGBP05060 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.26■■□□□ 1.31
CHGBP05060 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.25■■□□□ 1.31
CHGBP05060 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.25■■□□□ 1.31
CHGBP05060 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.25■■□□□ 1.31
CHGBP05060 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.25■■□□□ 1.31
CHGBP05060 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CHGBP05060 BX088651.1-201ENST00000540551 451 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms