Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CNOT4O95628 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.19■□□□□ 0.34
CNOT4O95628 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT4O95628 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.19■□□□□ 0.34
CNOT4O95628 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.19■□□□□ 0.34
CNOT4O95628 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNOT4O95628 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CNOT4O95628 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CNOT4O95628 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.18■□□□□ 0.34
CNOT4O95628 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CNOT4O95628 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT4O95628 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT4O95628 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT4O95628 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CNOT4O95628 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.18■□□□□ 0.34
CNOT4O95628 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CNOT4O95628 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CNOT4O95628 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT4O95628 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.18■□□□□ 0.34
CNOT4O95628 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT4O95628 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT4O95628 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CNOT4O95628 AC087499.1-201ENST00000418141 1075 ntBASIC17.17■□□□□ 0.34
CNOT4O95628 AL355355.2-201ENST00000442321 338 ntBASIC17.17■□□□□ 0.34
CNOT4O95628 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.17■□□□□ 0.34
CNOT4O95628 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.17■□□□□ 0.34
CNOT4O95628 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.17■□□□□ 0.34
CNOT4O95628 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.17■□□□□ 0.34
CNOT4O95628 AL031985.4-201ENST00000642138 673 ntBASIC17.17■□□□□ 0.34
CNOT4O95628 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT4O95628 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.17■□□□□ 0.34
CNOT4O95628 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CNOT4O95628 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNOT4O95628 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT4O95628 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT4O95628 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT4O95628 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.16■□□□□ 0.34
CNOT4O95628 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.16■□□□□ 0.34
CNOT4O95628 NUDT16P1-203ENST00000513809 620 ntBASIC17.16■□□□□ 0.34
CNOT4O95628 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CNOT4O95628 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 AC026471.5-201ENST00000615068 467 ntBASIC17.16■□□□□ 0.34
CNOT4O95628 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.16■□□□□ 0.34
CNOT4O95628 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.16■□□□□ 0.34
CNOT4O95628 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNOT4O95628 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.16■□□□□ 0.34
CNOT4O95628 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms